In case you didn't see the episode tonight:
Spoiler
Section 9 is now a dead section, and after an invasion on the order of the Prime Minister, everyone has split up: Aramaki turned his back on all the members. Togusa was stuck in endless interrogation about the faux Laughing Man mission from Episode 23. Paz and Burma were caught by the mercenaries sent in to destroy the Section 9 members (though their fates are unknown). The status of the other four (Saito, Ishikawa, Kusanagi, and Batou) are currently unknown, although Kusanagi has hinted that she will "modify her memories" while Batou looks to be going on his own investigation.
(I do know where the idea came from -- mainly it's an slight adaptation of what occurs in the next-to-last issue of the manga. Although, unlike the manga, they are more or less still alive even though Section 9 is presently history.)